CDS

Accession Number TCMCG007C37600
gbkey CDS
Protein Id XP_009137255.2
Location 11652498..11653838
Gene LOC103861302
GeneID 103861302
Organism Brassica rapa

Protein

Length 446aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009139007.3
Definition E3 ubiquitin-protein ligase RDUF1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description Zinc finger (C3HC4-type RING finger) family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K11982        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000209        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010200        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022412        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051865        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090376        [VIEW IN EMBL-EBI]
GO:0090378        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGCTCTTTCACTCCAGAACCACCGTTAATAACTCCGTAATCATCAGTCCAAGTCAACCAACATTTTCACGTGTTACAACGGTCCAATCTAACGCCGTTAACACTCACCTACAAAAAAAAAAAAAAAAAAACTGCGTTTATATAAGCAAACATTTTTTTCTTCTCCCTTCACTCATCATTATCAGATCCTTTAACCAGCAACCCAAATTTAAAGCTATGATGCCTTCTAGGTCGGCGACAACAACAACAGCTCCGACGACGACCGAAACAACAACGTCGTATTGGTGCTACAGTTGCACGCGTTTCGTCAGCGTTTCAAACGGCGGAGGATACGTCTTGTGTCCTTATTGCAACGGCGGTTTCATCGAAGAGGTTGAAGATTCTTCCGCCGCAGAAGCACCAACGACGACGACTCCGGTGTCTGAAGTCGAGGATAGTCATAGATCTGTAATTAGACGGCGGAGATCCAATCGGCGCACTTCGTTTAATCCGGTAATCGTCTTACACGGAGGAGCCGGAGGCGGTGGTGAGAGAGTTGAGAACGAAGAAGGAGATCGACGCCCTTATGAATTCTATTACGACGATGGATCCGGGTCGGGTCTTAGGGCGCTCCCGGAATCTGTATCGGAGATCTTGATGGGATCTGGATTCGAGCGGTTGCTAGAGCAATTGAGCCAGATCGAAGCGTCGGGCAACGGAATCGGGAGATCTGGGAACCCTCCGGCGTCGAAGTCAGCGATTGAATCTTTACCACGAGTCGAGATGGGAGAGTTGCACATCAAAGCGGAGGCGAATTGCGCCGTGTGCACGGAGGTTTTCGAGGCAGGAGCGGAAGGGCGTGAGATGCCGTGTAAGCACATTTTTCACGGCGATTGCATCGTCCCTTGGCTTTCGATACGGAACTCGTGCCCTGTTTGTCGATTTGAGTTGCCTTCGGATCCGGTTCAACGGAGTAACGAGGAGGAAGAACACGCTGTTGGTATGACGATCTGGAGACTTCCCGGAGGTGGATTCGCTGTTGGAAGGTTTAACGCGGCGATGAGAGAAGGGGAGAGGATTTTGCCGGTGGTGTTGACGGAAGTGGACGGTGGTGGGCTGGGGAGTAATGAGGGTCCGAGACGAATCTCTTGGGTTAGGGATCATGGCACACCGGAGATTAGCAGAAATGCTGCTCGCGCTGGTCGATTGAGGAGAGCAGCTCGGGGAATGATTTCGTTTATGAGGAGGATGAGACCAAATCTTCGTGCCTCTTCTTCTTCTAATGTTATTGATTTGGATACAAACGGTGAATCTAGGATTATGAATCGATCGACGTCGTTGATCAGAAGATTTTTCTGA
Protein:  
MTLFHSRTTVNNSVIISPSQPTFSRVTTVQSNAVNTHLQKKKKKNCVYISKHFFLLPSLIIIRSFNQQPKFKAMMPSRSATTTTAPTTTETTTSYWCYSCTRFVSVSNGGGYVLCPYCNGGFIEEVEDSSAAEAPTTTTPVSEVEDSHRSVIRRRRSNRRTSFNPVIVLHGGAGGGGERVENEEGDRRPYEFYYDDGSGSGLRALPESVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEMGELHIKAEANCAVCTEVFEAGAEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPVQRSNEEEEHAVGMTIWRLPGGGFAVGRFNAAMREGERILPVVLTEVDGGGLGSNEGPRRISWVRDHGTPEISRNAARAGRLRRAARGMISFMRRMRPNLRASSSSNVIDLDTNGESRIMNRSTSLIRRFF